HPC

Introduction to Rivanna

This tutorial is an introduction to using the Rivanna high-performance computing (HPC) system.

Using Bioinformatics Tools on Rivanna

This tutorial is an introduction to using several popular bioinformatics tools on Rivanna.

Minimal Containers

The industry standard of restricting containers to just the application and its dependencies often results in better security and smaller size. See how the use of multi-stage builds and scratch/distroless base images can reduce the image size by as much as 99% in real applications. This is a continuation of the Building Containers for Rivanna workshop.

Benchmarking Parallel Programs

Learn how to benchmark your program for parallel SLURM jobs.

Building Containers for Rivanna

Learn how to write Dockerfiles, build Docker images, run them on Rivanna using Singularity, and even create your own Jupyter kernel on our JupyterLab.

RAPIDS

Accelerate your data science pipeline with RAPIDS on NVIDIA GPUs

Introduction to Programming in MPI

The basics of parallel programming with MPI.

Introduction to Shared Memory Programming

An introduction to parallel programming using shared memory, including some GPU.

Building and Running C/C++ and Fortran Codes on Rivanna

This tutorial will teach you to compile, link, and run on Rivanna programs written in C, C++, or Fortran.

Singularity Containers for HPC

An introduction to creating, and utilizing Singularity containers on an HPC system.